MaMiCo 1.2
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InstanceHandling.h
1// Copyright (C) 2016 Technische Universitaet Muenchen
2// This file is part of the Mamico project. For conditions of distribution
3// and use, please see the copyright notice in Mamico's main folder, or at
4// www5.in.tum.de/mamico
5#ifndef _INSTANCE_HANDLING_H_
6#define _INSTANCE_HANDLING_H_
7
8#include "coupling/interface/MDSimulationFactory.h"
9#include "coupling/services/MultiMDCellService.h"
10#include "tarch/utils/MultiMDService.h"
11
12namespace coupling {
13template <class LinkedCell, unsigned int dim> class InstanceHandling;
14}
15class InstanceHandlingTest;
16
36template <class LinkedCell, unsigned int dim> class coupling::InstanceHandling {
37
38public:
44 InstanceHandling(simplemd::configurations::MolecularDynamicsConfiguration& mdConfig, coupling::configurations::MaMiCoConfiguration<dim>& mamicoConfig,
46 : _mdSimulations(), _mdSolverInterface(), _mdConfig(mdConfig), _mamicoConfig(mamicoConfig), _multiMDService(multiMDService) {
47 for (unsigned int i = 0; i < multiMDService.getLocalNumberOfMDSimulations(); i++) {
48 _mdSimulations.push_back(coupling::interface::SimulationAndInterfaceFactory::getInstance().getMDSimulation(_mdConfig, _mamicoConfig
49#if (COUPLING_MD_PARALLEL == COUPLING_MD_YES)
50 ,
51 _multiMDService.getLocalCommunicator()
52#endif
53 ));
54
55 if (_mdSimulations[i] == nullptr) {
56 std::cout << "ERROR InstanceHandling : _mdSimulations [" << i << "] == NULL!" << std::endl;
57 std::exit(EXIT_FAILURE);
58 }
59
60 _mdSimulations[i]->init(_multiMDService, _multiMDService.getGlobalNumberOfLocalMDSimulation(i));
61 }
62 }
63
66 ~InstanceHandling() { shutdown(); }
67
74 void equilibrate(const unsigned int& t, const unsigned int& T) {
75 for (auto& md : _mdSimulations) {
76 md->switchOffCoupling();
77 md->simulateTimesteps(t, T);
78 }
79 }
80
84 auto& getSimpleMD() const { return _mdSimulations; }
85
90
91 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
92 _mdSolverInterface.push_back(
94 if (_mdSolverInterface[i] == NULL) {
95 std::cout << "ERROR InstanceHandling: mdSolverInterface[" << i << "] == NULL!" << std::endl;
96 exit(EXIT_FAILURE);
97 }
98 }
99 }
100
104 auto& getMDSolverInterface() const { return _mdSolverInterface; }
105
111 for (auto& simpleMD : _mdSimulations) {
112 simpleMD->switchOnCoupling();
113 }
114 }
115
121 void switchOnCoupling(const unsigned int& i) { _mdSimulations[i]->switchOnCoupling(); }
122
127 for (auto& simpleMD : _mdSimulations) {
128 simpleMD->switchOffCoupling();
129 }
130 }
131
136 void switchOffCoupling(const unsigned int& i) { _mdSimulations[i]->switchOffCoupling(); }
137
142 void simulateTimesteps(const unsigned int& t, unsigned int& T) {
143 for (auto& simpleMD : _mdSimulations) {
144 simpleMD->simulateTimesteps(t, T);
145 }
146 }
147
153 void writeCheckpoint(const std::string& filestem, const unsigned int& T) const {
154 if (_mdSimulations.size() > 0 && _mdSimulations[0] != nullptr) {
155 _mdSimulations[0]->writeCheckpoint(filestem, T);
156 }
157 }
158
165 void simulateTimesteps(const unsigned int& t, unsigned int& T, coupling::services::MultiMDCellService<LinkedCell, dim>& multiMDCellService) {
166 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
169
170 if (_mdSimulations[i] != nullptr) {
171 _mdSimulations[i]->simulateTimesteps(t, T);
172 }
173 }
174 }
175
182 void simulateTimesteps(const unsigned int& t, unsigned int& T, const unsigned int& i) { _mdSimulations[i]->simulateTimesteps(t, T); }
183
188 _mdSimulations.push_back(nullptr);
189 _mdSolverInterface.push_back(nullptr);
190 }
191
196 _mdSimulations.pop_back();
197 _mdSolverInterface.pop_back();
198 }
199
210#if (COUPLING_MD_PARALLEL == COUPLING_MD_YES)
211 ,
212 _multiMDService.getLocalCommunicator()
213#endif
214 );
215 if (mdSim == NULL) {
216 std::cout << "ERROR! coupling::InstanceHandling::addMDSimulation(): "
217 "mdSim == NULL!"
218 << std::endl;
219 std::exit(EXIT_FAILURE);
220 }
221
222 mdSim->init(_multiMDService, slot);
223
224 _mdSimulations[localIndex] = mdSim;
225
226 _mdSolverInterface[localIndex] =
227 coupling::interface::SimulationAndInterfaceFactory::getInstance().getMDSolverInterface(_mdConfig, _mamicoConfig, _mdSimulations[localIndex]);
228
229 return _mdSolverInterface[localIndex];
230 }
231
236 void rmMDSimulation(const unsigned int& index) {
237 if (_mdSimulations[index] != nullptr) {
238 _mdSimulations[index]->shutdown();
239 delete _mdSimulations[index];
240 _mdSimulations[index] = nullptr;
241 } else {
242 std::cout << "WARNING coupling::InstanceHandling::rmMDSimulation() : "
243 "_mdSimulations at index "
244 << index << " == null!" << std::endl;
245 }
246 //_mdSimulations.erase(_mdSimulations.begin()+index);
247
248 if (_mdSolverInterface[index] != nullptr) {
249 delete _mdSolverInterface[index];
250 _mdSolverInterface[index] = nullptr;
251 } else {
252 std::cout << "WARNING coupling::InstanceHandling::rmMDSimulation() : "
253 "_mdSolverInterface at index "
254 << index << " == null!" << std::endl;
255 }
256 //_mdSolverInterface.erase(_mdSolverInterface.begin()+index);
257 }
258
264 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
265 _mdSimulations[i]->setCouplingCellService(&(multiMDCellService.getCouplingCellService(i)));
266 }
267 }
268
269private:
270 void shutdown() {
271 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
273 if (_mdSimulations[i] != nullptr) {
274 _mdSimulations[i]->shutdown();
275 delete _mdSimulations[i];
276 _mdSimulations[i] = nullptr;
277 }
279 }
280 _mdSimulations.clear();
281 for (auto& solverInterface : _mdSolverInterface) {
282 if (solverInterface != nullptr) {
283 delete solverInterface;
284 solverInterface = nullptr;
285 }
286 }
287 _mdSolverInterface.clear();
288 }
289
290 std::vector<coupling::interface::MDSimulation*> _mdSimulations;
291 std::vector<coupling::interface::MDSolverInterface<LinkedCell, dim>*> _mdSolverInterface;
292
293 simplemd::configurations::MolecularDynamicsConfiguration& _mdConfig;
294 coupling::configurations::MaMiCoConfiguration<dim>& _mamicoConfig;
295
296 const tarch::utils::MultiMDService<dim>& _multiMDService;
297 friend InstanceHandlingTest;
298};
299
300#endif //_INSTANCE_HANDLING_H_
Simulation slots are managed (i.e., added/removed) via this class. Works and interacts with the class...
Definition InstanceHandling.h:36
InstanceHandling(simplemd::configurations::MolecularDynamicsConfiguration &mdConfig, coupling::configurations::MaMiCoConfiguration< dim > &mamicoConfig, tarch::utils::MultiMDService< dim > &multiMDService)
Definition InstanceHandling.h:44
auto & getMDSolverInterface() const
Definition InstanceHandling.h:104
void setMDSolverInterface()
Definition InstanceHandling.h:89
void simulateTimesteps(const unsigned int &t, unsigned int &T, const unsigned int &i)
Definition InstanceHandling.h:182
auto & getSimpleMD() const
Definition InstanceHandling.h:84
void simulateTimesteps(const unsigned int &t, unsigned int &T, coupling::services::MultiMDCellService< LinkedCell, dim > &multiMDCellService)
Definition InstanceHandling.h:165
void switchOnCoupling(const unsigned int &i)
Definition InstanceHandling.h:121
void writeCheckpoint(const std::string &filestem, const unsigned int &T) const
Definition InstanceHandling.h:153
void switchOffCoupling(const unsigned int &i)
Definition InstanceHandling.h:136
void switchOffCoupling()
Definition InstanceHandling.h:126
void equilibrate(const unsigned int &t, const unsigned int &T)
Definition InstanceHandling.h:74
void rmMDSimulation(const unsigned int &index)
Definition InstanceHandling.h:236
void rmSimulationBlock()
Definition InstanceHandling.h:195
void setCouplingCellServices(coupling::services::MultiMDCellService< LinkedCell, dim > &multiMDCellService)
Definition InstanceHandling.h:263
void switchOnCoupling()
Definition InstanceHandling.h:110
void addSimulationBlock()
Definition InstanceHandling.h:187
coupling::interface::MDSolverInterface< LinkedCell, dim > * addMDSimulation(unsigned int slot, unsigned int localIndex)
Definition InstanceHandling.h:208
void simulateTimesteps(const unsigned int &t, unsigned int &T)
Definition InstanceHandling.h:142
~InstanceHandling()
Definition InstanceHandling.h:66
parses all sub-tags for MaMiCo configuration.
Definition MaMiCoConfiguration.h:31
interface to the MD simulation
Definition MDSolverInterface.h:25
void setMDSolverInterface(coupling::interface::MDSolverInterface< LinkedCell, dim > *mdSolverInterface)
Definition MamicoInterfaceProvider.h:48
coupling::interface::MDSolverInterface< LinkedCell, dim > * getMDSolverInterface()
Definition MamicoInterfaceProvider.h:53
static MamicoInterfaceProvider & getInstance()
Definition MamicoInterfaceProvider.h:28
void setCouplingCellService(coupling::services::CouplingCellService< dim > *couplingCellService)
Definition MamicoInterfaceProvider.h:58
static SimulationAndInterfaceFactory & getInstance()
Definition MDSimulationFactory.h:62
coupling::interface::MDSolverInterface< MY_LINKEDCELL, MDSIMULATIONFACTORY_DIMENSION > * getMDSolverInterface(const simplemd::configurations::MolecularDynamicsConfiguration &configuration, const coupling::configurations::MaMiCoConfiguration< MDSIMULATIONFACTORY_DIMENSION > &mamicoConfiguration, coupling::interface::MDSimulation *mdSimulation)
Definition MDSimulationFactory.h:122
coupling::interface::MDSimulation * getMDSimulation(const simplemd::configurations::MolecularDynamicsConfiguration &configuration, const coupling::configurations::MaMiCoConfiguration< MDSIMULATIONFACTORY_DIMENSION > &mamicoConfiguration, MPI_Comm localComm)
Definition MDSimulationFactory.h:74
Definition MultiMDCellService.h:29
coupling::services::CouplingCellService< dim > & getCouplingCellService(unsigned int localIndex)
Definition MultiMDCellService.h:157
Definition MultiMDService.h:30
everything necessary for coupling operations, is defined in here
Definition AdditiveMomentumInsertion.h:15