MaMiCo 1.2
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InstanceHandling.h
1// Copyright (C) 2016 Technische Universitaet Muenchen
2// This file is part of the Mamico project. For conditions of distribution
3// and use, please see the copyright notice in Mamico's main folder, or at
4// www5.in.tum.de/mamico
5#ifndef _INSTANCE_HANDLING_H_
6#define _INSTANCE_HANDLING_H_
7
8#include "coupling/interface/MDSimulationFactory.h"
9#include "coupling/services/MultiMDCellService.h"
10#include "tarch/utils/MultiMDService.h"
11
12namespace coupling {
13template <class LinkedCell, unsigned int dim> class InstanceHandling;
14}
15
35template <class LinkedCell, unsigned int dim> class coupling::InstanceHandling {
36
37public:
43 InstanceHandling(simplemd::configurations::MolecularDynamicsConfiguration& mdConfig, coupling::configurations::MaMiCoConfiguration<dim>& mamicoConfig,
45 : _mdSimulations(), _mdSolverInterface(), _mdConfig(mdConfig), _mamicoConfig(mamicoConfig), _multiMDService(multiMDService) {
46 for (unsigned int i = 0; i < multiMDService.getLocalNumberOfMDSimulations(); i++) {
47 _mdSimulations.push_back(coupling::interface::SimulationAndInterfaceFactory::getInstance().getMDSimulation(_mdConfig, _mamicoConfig
48#if (COUPLING_MD_PARALLEL == COUPLING_MD_YES)
49 ,
50 _multiMDService.getLocalCommunicator()
51#endif
52 ));
53
54 if (_mdSimulations[i] == nullptr) {
55 std::cout << "ERROR InstanceHandling : _mdSimulations [" << i << "] == NULL!" << std::endl;
56 std::exit(EXIT_FAILURE);
57 }
58
59 _mdSimulations[i]->init(_multiMDService, _multiMDService.getGlobalNumberOfLocalMDSimulation(i));
60 }
61 }
62
66 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
68 if (_mdSimulations[i] != nullptr) {
69 _mdSimulations[i]->shutdown();
70 delete _mdSimulations[i];
71 _mdSimulations[i] = nullptr;
72 }
74 }
75 _mdSimulations.clear();
76 for (auto& solverInterface : _mdSolverInterface) {
77 if (solverInterface != nullptr) {
78 delete solverInterface;
79 solverInterface = nullptr;
80 }
81 }
82 _mdSolverInterface.clear();
83 }
84
91 void equilibrate(const unsigned int& t, const unsigned int& T) {
92 for (auto& md : _mdSimulations) {
93 md->switchOffCoupling();
94 md->simulateTimesteps(t, T);
95 }
96 }
97
101 auto& getSimpleMD() const { return _mdSimulations; }
102
107
108 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
109 _mdSolverInterface.push_back(
111 if (_mdSolverInterface[i] == NULL) {
112 std::cout << "ERROR InstanceHandling: mdSolverInterface[" << i << "] == NULL!" << std::endl;
113 exit(EXIT_FAILURE);
114 }
115 }
116 }
117
121 auto& getMDSolverInterface() const { return _mdSolverInterface; }
122
128 for (auto& simpleMD : _mdSimulations) {
129 simpleMD->switchOnCoupling();
130 }
131 }
132
138 void switchOnCoupling(const unsigned int& i) { _mdSimulations[i]->switchOnCoupling(); }
139
144 for (auto& simpleMD : _mdSimulations) {
145 simpleMD->switchOffCoupling();
146 }
147 }
148
153 void switchOffCoupling(const unsigned int& i) { _mdSimulations[i]->switchOffCoupling(); }
154
159 void simulateTimesteps(const unsigned int& t, unsigned int& T) {
160 for (auto& simpleMD : _mdSimulations) {
161 simpleMD->simulateTimesteps(t, T);
162 }
163 }
164
170 void writeCheckpoint(const std::string& filestem, const unsigned int& T) const {
171 if (_mdSimulations.size() > 0 && _mdSimulations[0] != nullptr) {
172 _mdSimulations[0]->writeCheckpoint(filestem, T);
173 }
174 }
175
182 void simulateTimesteps(const unsigned int& t, unsigned int& T, coupling::services::MultiMDCellService<LinkedCell, dim>& multiMDCellService) {
183 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
186
187 if (_mdSimulations[i] != nullptr) {
188 _mdSimulations[i]->simulateTimesteps(t, T);
189 }
190 }
191 }
192
199 void simulateTimesteps(const unsigned int& t, unsigned int& T, const unsigned int& i) { _mdSimulations[i]->simulateTimesteps(t, T); }
200
205 _mdSimulations.push_back(nullptr);
206 _mdSolverInterface.push_back(nullptr);
207 }
208
213 _mdSimulations.pop_back();
214 _mdSolverInterface.pop_back();
215 }
216
227#if (COUPLING_MD_PARALLEL == COUPLING_MD_YES)
228 ,
229 _multiMDService.getLocalCommunicator()
230#endif
231 );
232 if (mdSim == NULL) {
233 std::cout << "ERROR! coupling::InstanceHandling::addMDSimulation(): "
234 "mdSim == NULL!"
235 << std::endl;
236 std::exit(EXIT_FAILURE);
237 }
238
239 mdSim->init(_multiMDService, slot);
240
241 _mdSimulations[localIndex] = mdSim;
242
243 _mdSolverInterface[localIndex] =
244 coupling::interface::SimulationAndInterfaceFactory::getInstance().getMDSolverInterface(_mdConfig, _mamicoConfig, _mdSimulations[localIndex]);
245
246 return _mdSolverInterface[localIndex];
247 }
248
253 void rmMDSimulation(const unsigned int& index) {
254 if (_mdSimulations[index] != nullptr) {
255 _mdSimulations[index]->shutdown();
256 delete _mdSimulations[index];
257 _mdSimulations[index] = nullptr;
258 } else {
259 std::cout << "WARNING coupling::InstanceHandling::rmMDSimulation() : "
260 "_mdSimulations at index "
261 << index << " == null!" << std::endl;
262 }
263 //_mdSimulations.erase(_mdSimulations.begin()+index);
264
265 if (_mdSolverInterface[index] != nullptr) {
266 delete _mdSolverInterface[index];
267 _mdSolverInterface[index] = nullptr;
268 } else {
269 std::cout << "WARNING coupling::InstanceHandling::rmMDSimulation() : "
270 "_mdSolverInterface at index "
271 << index << " == null!" << std::endl;
272 }
273 //_mdSolverInterface.erase(_mdSolverInterface.begin()+index);
274 }
275
281 for (unsigned int i = 0; i < _mdSimulations.size(); ++i) {
282 _mdSimulations[i]->setCouplingCellService(&(multiMDCellService.getCouplingCellService(i)));
283 }
284 }
285
286private:
287 std::vector<coupling::interface::MDSimulation*> _mdSimulations;
288 std::vector<coupling::interface::MDSolverInterface<LinkedCell, dim>*> _mdSolverInterface;
289
290 simplemd::configurations::MolecularDynamicsConfiguration& _mdConfig;
292
293 const tarch::utils::MultiMDService<dim>& _multiMDService;
294};
295
296#endif //_INSTANCE_HANDLING_H_
Simulation slots are managed (i.e., added/removed) via this class. Works and interacts with the class...
Definition InstanceHandling.h:35
InstanceHandling(simplemd::configurations::MolecularDynamicsConfiguration &mdConfig, coupling::configurations::MaMiCoConfiguration< dim > &mamicoConfig, tarch::utils::MultiMDService< dim > &multiMDService)
Definition InstanceHandling.h:43
auto & getMDSolverInterface() const
Definition InstanceHandling.h:121
void setMDSolverInterface()
Definition InstanceHandling.h:106
void simulateTimesteps(const unsigned int &t, unsigned int &T, const unsigned int &i)
Definition InstanceHandling.h:199
auto & getSimpleMD() const
Definition InstanceHandling.h:101
void simulateTimesteps(const unsigned int &t, unsigned int &T, coupling::services::MultiMDCellService< LinkedCell, dim > &multiMDCellService)
Definition InstanceHandling.h:182
void switchOnCoupling(const unsigned int &i)
Definition InstanceHandling.h:138
void writeCheckpoint(const std::string &filestem, const unsigned int &T) const
Definition InstanceHandling.h:170
void switchOffCoupling(const unsigned int &i)
Definition InstanceHandling.h:153
void switchOffCoupling()
Definition InstanceHandling.h:143
void equilibrate(const unsigned int &t, const unsigned int &T)
Definition InstanceHandling.h:91
void rmMDSimulation(const unsigned int &index)
Definition InstanceHandling.h:253
void rmSimulationBlock()
Definition InstanceHandling.h:212
void setCouplingCellServices(coupling::services::MultiMDCellService< LinkedCell, dim > &multiMDCellService)
Definition InstanceHandling.h:280
void switchOnCoupling()
Definition InstanceHandling.h:127
void addSimulationBlock()
Definition InstanceHandling.h:204
coupling::interface::MDSolverInterface< LinkedCell, dim > * addMDSimulation(unsigned int slot, unsigned int localIndex)
Definition InstanceHandling.h:225
void simulateTimesteps(const unsigned int &t, unsigned int &T)
Definition InstanceHandling.h:159
~InstanceHandling()
Definition InstanceHandling.h:65
parses all sub-tags for MaMiCo configuration.
Definition MaMiCoConfiguration.h:31
interface to the MD simulation
Definition MDSolverInterface.h:25
void setMDSolverInterface(coupling::interface::MDSolverInterface< LinkedCell, dim > *mdSolverInterface)
Definition MamicoInterfaceProvider.h:48
coupling::interface::MDSolverInterface< LinkedCell, dim > * getMDSolverInterface()
Definition MamicoInterfaceProvider.h:53
static MamicoInterfaceProvider & getInstance()
Definition MamicoInterfaceProvider.h:28
void setCouplingCellService(coupling::services::CouplingCellService< dim > *couplingCellService)
Definition MamicoInterfaceProvider.h:58
static SimulationAndInterfaceFactory & getInstance()
Definition MDSimulationFactory.h:60
coupling::interface::MDSolverInterface< MY_LINKEDCELL, MDSIMULATIONFACTORY_DIMENSION > * getMDSolverInterface(const simplemd::configurations::MolecularDynamicsConfiguration &configuration, const coupling::configurations::MaMiCoConfiguration< MDSIMULATIONFACTORY_DIMENSION > &mamicoConfiguration, coupling::interface::MDSimulation *mdSimulation)
Definition MDSimulationFactory.h:120
coupling::interface::MDSimulation * getMDSimulation(const simplemd::configurations::MolecularDynamicsConfiguration &configuration, const coupling::configurations::MaMiCoConfiguration< MDSIMULATIONFACTORY_DIMENSION > &mamicoConfiguration, MPI_Comm localComm)
Definition MDSimulationFactory.h:72
Definition MultiMDCellService.h:29
coupling::services::CouplingCellService< dim > & getCouplingCellService(unsigned int localIndex)
Definition MultiMDCellService.h:157
Definition MultiMDService.h:30
everything necessary for coupling operations, is defined in here
Definition AdditiveMomentumInsertion.h:15